Clustering

The specious art of single-cell genomics - T. Chari, and L. Pachter, 2023.

Explores problems with low-dimensional embeddings.

Elephant-shaped embeddings
Biophysically Interpretable Inference of Cell Types from Multimodal Sequencing Data - T. Chari, G. Gorin, and L. Pachter, 2023.

Enables interpretable and consistent cell cluster determination from multimodal data.

meK-Means Inference